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Do you happen to leave your virus scanner on? I know for me disabling Norton will speed up just about everything, backing up a DVD with Norton on takes about 50 minutes with it off it takes 40 minutes. Also make sure there isn't anything running in the background and try not to use your CPU while its running. Seems like I recall Catobase takes alot of memory to run all of its processes so your biggest problem could be the small amount of memory you have. Memory is pretty cheap so you could probably double your memory for less than $50 and you will seen an overall improvment running everything on the CPU.
Also keep in mind that player pages don't have to be created after each year, usually what I would do would be create the team/league pages each your which would take very little time and then create all the player pages ever 5 season or so. I found very little time difference in running them for 1 season or 10.
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